Welcome to the Amira-Avizo Software Use Case Gallery

Below you will find a collection of use cases of our 3D data visualization and analysis software. These use cases include scientific publications, articles, papers, posters, presentations or even videos that show how Amira-Avizo Software is used to address various scientific and industrial research topics.

Use the Domain selector to filter by main application area, and use the Search box to enter keywords related to specific topics you are interested in.

X-ray tomography-assisted study of a phase inversion process in ceramic hollow fiber systems – Towards practical structural design

X-ray tomography-assisted study of a phase inversion process in ceramic hollow fiber systems – Towards practical structural design

In this study, a series of alumina hollow fibers have been prepared with varied polymer binder (polyethersulfone, PESf) concentration and new polymer-based internal coagulant (aqueous solution of polyvinyl alcohol, PVA). For the first time, the micro-channels were characterized in 3D using X-ray CT to determine micro-channel densities and diameters in the radial direction, as well as the 2D measurement of the pore size in the sponge-like layer.

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Tao Li, Xuekun Lu, Bo Wang, Zhentao Wu, Kang Li, Dan J.L. Brett, Paul R. Shearing

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Glass fiber length and orientation analysis of reinforced polymers (GFRP)

Glass fiber length and orientation analysis of reinforced polymers (GFRP)

Royal DSM is a global science-based company active in health, nutrition and
materials. Within DSM’s Materials Cluster DSM Engineering Plastics is a global player in specialty plastics. These materials are used in components for the electrical and electronics, automotive, flexible food packaging and consumer goods industries.

A typical product made of DSM Engineering Plastics’ polymer portfolio are USB-C connectors. Key performance indicators for this application are dimension... Read more

Jennifer Schillings, Arno Wilbers and Joachim Loos, DSM Materials Science Center, Geleen, The Netherlands

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Contrast-enhanced 3D micro-CT of plant tissues using different impregnation techniques

Contrast-enhanced 3D micro-CT of plant tissues using different impregnation techniques

X-ray micro-CT has increasingly been used for 3D imaging of plant structures. At the micrometer reso-lution however, limitations in X-ray contrast often lead to datasets with poor qualitative and quantitative measures, especially within dense cell clusters of plant tissue specimens. The current study developed protocols for delivering a cesium based contrast enhancing solution to varying plant tissue specimens for the purpose of improving 3D tissue structure characterization within plant spec... Read more

Zi Wang, Pieter Verboven and Bart Nicolai, Department of Biosystems KU Leuven – University of Leuven Willem de Croylaan, Leuven Belgium

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The Oriental Institute of the University of Chicago uses Amira sotware to visualize and analyze Egyptian mummified birds

The Oriental Institute of the University of Chicago uses Amira sotware to visualize and analyze Egyptian mummified birds

Entering this special exhibit at the Oriental Institute Museum at the University of Chicago, you will immediately feel transported into the ancient  Nile delta marshlands with its lush green flora.

The combination of colors, video footage, bird songs, and ancient artifacts will give you the impression that you have just traveled through time and space.

At the start of the exhibit, you will find one of their most impressive artifacts, an empty shell of an ostrich egg from 3100 B... Read more

Rozenn Bailleul-LeSuer, The University of Chicago, Department of Near Eastern Languages and Civilizations

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Unilever uses Avizo software to visualize and understand food and detergent structures

Unilever uses Avizo software to visualize and understand food and detergent structures

Food and detergent products are composed of complex micro structures. With modern microscopic techniques we can make them visible. The microstructure greatly affects macroscopic properties such as appearance, taste, mouth feel and solubility. Making these structures visible and quantifying them is essential to the development of products with optimal product properties. A broad range of imaging techniques is used to visualize microstructure elements at different length scales. For example, X-... Read more

Gerard van Dalen, Unilever R&D Vlaardingen (The Netherlands)

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Propagation-based phase-contrast x-ray tomography of cochlea using a compact synchrotron source

Propagation-based phase-contrast x-ray tomography of cochlea using a compact synchrotron source

We demonstrate that phase retrieval and tomographic imaging at the organ level of small animals can be advantageously carried out using the monochromatic radiation emitted by a compact x-ray light source, without further optical elements apart from source and detector. This approach allows to carry out microtomography experiments which – due to the large performance gap with respect to conventional laboratory instruments – so far were usually limited to synchrotron sources. We dem... Read more

Mareike Töpperwien, Regine Gradl, Daniel Keppeler, Malte Vassholz, Alexander Meyer, Roland Hessler, Klaus Achterhold, Bernhard Gleich, Martin Dierolf, Franz Pfeiffer, Tobias Moser & Tim Salditt

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A multi-scale correlative investigation of ductile fracture

A multi-scale correlative investigation of ductile fracture

The use of novel multi-scale correlative methods, which involve the coordinated characterization of matter across a range of length scales, are becoming of increasing value to materials scientists. Here, we describe for the first time how a multi-scale correlative approach can be used to investigate the nature of ductile fracture in metals. Specimens of a nuclear pressure vessel steel, SA508 Grade 3, are examined following ductile fracture using medium and high-resolution 3D X-ray computed to... Read more

School of Materials, University of Manchester; National Nuclear Laboratory; BAM Federal Institute for Materials Research and Testing; Thermo Fischer Scientific

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Hydraulic properties of porous sintered glass bead systems

Hydraulic properties of porous sintered glass bead systems

In this paper, porous sintered glass bead packings are studied, using X-ray Computed Tomography (XRCT) images at 16μm16μm voxel resolution, to obtain not only the porosity field, but also other properties like particle sizes, pore throats and the permeability. The influence of the sintering procedure and the original particle size distributions on the microstructure, and thus on the hydraulic properties, is analyzed in detail. The XRCT data are visualized and studied by advanced image fil... Read more

University of Twente, Enschede | Ruhr-University Bochum; Eindhoven University of Technology | Helmholtz Institute Erlangen-Nürnberg for Renewable Energy | University of Stuttgart

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X-ray computed tomography of packed bed chromatography columns for three dimensional imaging and analysis

X-ray computed tomography of packed bed chromatography columns for three dimensional imaging and analysis

Physical characteristics critical to chromatography including geometric porosity and tortuosity within the packed column were analysed based upon three dimensional reconstructions of bed structure in-situ. Image acquisition was performed using two X-ray computed tomography systems, with optimisation of column imaging performed for each sample in order to produce three dimensional representations of packed beds at 3 μm resolution.

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Department of Biochemical Engineering, University College London | Pall Life Sciences, Portsmouth | Electrochemical Innovation Lab, Department of Chemical Engineering, University College London

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Evolutionary radiation of earless frogs in the Andes: molecular phylogenetics and habitat shifts in high-elevation terrestrial breeding frogs

Evolutionary radiation of earless frogs in the Andes: molecular phylogenetics and habitat shifts in high-elevation terrestrial breeding frogs

The loss of hearing structures and loss of advertisement calls in many terrestrial breeding frogs (Strabomantidae) living at high elevations in South America are common and intriguing phenomena. The Andean frog genus Phrynopus Peters, 1873 has undergone an evolutionary radiation in which most species lack the tympanic membrane and tympanic annulus, yet the phylogenetic relationships among species in this group remain largely unknown. Here, we present an expanded molecular phylogeny o... Read more

May R, Lehr E, Rabosky DL. PeerJ 6:e4313

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The NOVA project: maximizing beam time efficiency through synergistic analyses of SRµCT data

The NOVA project: maximizing beam time efficiency through synergistic analyses of SRµCT data

Beamtime and resulting SRμCT data are a valuable resource for researchers of a broad scientific community in life sciences. Most research groups, however, are only interested in a specific organ and use only a fraction of their data. The rest of the data usually remains untapped. By using a new collaborative approach, the NOVA project (Network for Online Visualization and synergistic Analysis of tomographic data) aims to demonstrate, that more efficient use of the valuable beam time is possi... Read more

The international society for optics and photonics (SPIE)

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KTH Royal Institute of Technology uses Avizo software to visualize and characterize the internal structure of civil engineering materials

KTH Royal Institute of Technology uses Avizo software to visualize and characterize the internal structure of civil engineering materials

The Division of Highway and Railway Engineering, Royal Institute of Technology (KTH) promotes advances in computational and experimental science in order to develop new materials, tools and systems for improved mobility, transportation safety and infrastructure durability. The group works on analysis and performance-based design of roads and tracks, management as well as operation and maintenance of roads.

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Denis Jelagin, Alvaro Guarin, Ibrahim Onifade, Nicole Kringos, and Bjorn Birgisson (KTH)

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SIK-ISEA uses Avizo software to understand 19th century painting techniques

SIK-ISEA uses Avizo software to understand 19th century painting techniques

The characterization of the porosity of ground layers in easel paintings: a first step towards understanding its role in water uptake, reactivity and material transport in 19th and early 20th century paintings. The Swiss Institute for Art Research (SIK-ISEA) is studying the studio practice of Swiss painters of the late 19th early 20th century, the materials they used for their paintings, and the deterioration processes the paintings undergo as they age.

Amongst other issues this study... Read more

SIK-ISEA

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The Brazilian Synchrotron Light Laboratory (LNLS) uses Avizo to visualize and analyze scientific and industrial 3D data acquired with their X-Ray Imaging Beamline (IMX)

The Brazilian Synchrotron Light Laboratory (LNLS) uses Avizo to visualize and analyze scientific and industrial 3D data acquired with their X-Ray Imaging Beamline (IMX)

The imaging beamline, IMX, at LNLS extracts synchrotron radiation from bending magnet D6 with magnetic field of 1.67 T and bending radius of 2.736 m. It has an electron source size of 391 Read more

Brazilian Synchotron Light Laboratory

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