Welcome to the Amira-Avizo Software Use Case Gallery

Below you will find a collection of use cases of our 3D data visualization and analysis software. These use cases include scientific publications, articles, papers, posters, presentations or even videos that show how Amira-Avizo Software is used to address various scientific and industrial research topics.

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Machine learning‑based texture analysis for diferentiation of radiologically indeterminate small adrenal tumors on adrenal protocol CT scans

Machine learning‑based texture analysis for diferentiation of radiologically indeterminate small adrenal tumors on adrenal protocol CT scans

To evaluate the ability of radiomic feature extraction and a machine learning algorithm to diferentiate between benign
and malignant indeterminate adrenal lesions on contrast-enhanced computed tomography (CT) studies.

Adrenal “incidentalomas” are adrenal lesions that are accidentally discovered during workup not related to the adrenal glands; they have an incidence as high as 5%. Small adrenal incidentalomas (<4 cm) with high attenuation values on pre-contrast CT(>10 H... Read more

Ahmed W. Moawad, Ayahallah Ahmed, David T. Fuentes, John D. Hazle, Mouhammed A. Habra, Khaled M. Elsayes

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Nephrometric score based on 3D modeling (3D nephrometry score) for the probability prediction of intraand postoperative complications for kidney surgery

Nephrometric score based on 3D modeling (3D nephrometry score) for the probability prediction of intraand postoperative complications for kidney surgery

The purpose of the study is the development and evaluation of the informativeness of the author’s 3D nephrometric score application to predict the probability of intraoperative and postoperative complications in kidney operations.

The study includes 264 patients who underwent surgical treatment of renal tumors, before that CT and 3D modeling were carried out. All patients underwent an analysis of the surgical intervention complexity on the C-index, PADUA, R.E.N.A.L., and developed 3D... Read more

Georgiy Andreevich Mashin, Vasiliy Vladimirovich Kozlov, Denis Vladimirovich Chinenov, Yaroslav Nikolaevich Chernov, Alexandra Vladimirovna Proskura, Dmitry Olegovich Korolev , Dmitry Georgievich Tsarichenko, Leonid Mikhailovich Rapoport and Evgeniy Valerievich Shpot

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Spatiotemporal endothelial cell – pericyte association in tumors as shown by high resolution 4D intravital imaging

Spatiotemporal endothelial cell – pericyte association in tumors as shown by high resolution 4D intravital imaging

Endothelial cells and pericytes are integral cellular components of the vasculature with distinct interactive functionalities. To study dynamic interactions between these two cells we created two transgenic animal lines. A truncated eNOS (endothelial nitric oxide synthase) construct was used as a GFP tag for endothelial cell evaluation and an inducible Cre-lox recombination, under control of the Pdgfrb (platelet derived growth factor receptor beta) promoter, was created for pericyte assessmen... Read more

Ann L. B. Seynhaeve, Douwe Oostinga, Rien van Haperen, Hanna M. Eilken, Susanne Adams, Ralf H. Adams & Timo L. M. ten Hagen

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